| Week | Date | Subject | Notes |
| 1 | 1/25 | Course Overview | HW0 out |
| 1/27 | Learning Motif Models | |
| 2 | 2/1 | Learning Motif Models | |
| 2/3 | Learning Motif Models | |
| 3 | 2/8 | Learning CRM Models | HW0 due, HW1 out |
| 2/10 | Genotype Analysis | |
| 4 | 2/15 | Genotype Analysis | |
| 2/17 | Genotype Analysis | |
| 5 | 2/22 | Epigenomics | |
| 2/24 | Epigenomics | |
| 6 | 3/1 | Epigenomics | HW1 due, HW2 out |
| 3/3 | RNA Analysis & Gene Discovery | |
| 7 | 3/8 | RNA Analysis & Gene Discovery | |
| 3/10 | Midterm exam | in class |
| Spring Break (3/12-20) |
| 9 | 3/22 | Network Biology | Proposal due |
| 3/24 | Network Biology | HW2 due, HW3 out |
| 10 | 3/29 | Machine Learning in Bioinformatics | |
| 3/31 | Machine Learning in Bioinformatics | |
| 11 | 4/5 | Deep Learning Applications | |
| 4/7 | Deep Learning Applications | |
| 12 | 4/12 | Single-cell RNA-seq Analysis | |
| 4/14 | Single-cell RNA-seq Analysis | HW3 due, HW4 out |
| 13 | 4/19 | Single-cell RNA-seq Analysis | |
| 4/21 | Single-cell RNA-seq Analysis | Progress report due |
| 14 | 4/26 | Multi-modal Data Analysis | |
| 4/28 | Multi-modal Data Analysis | |
| 15 | 5/3 | Project Presentations | HW4 due |
| 5/5 | Project Presentations | |
| 16 | 5/8 | Final exam | 10:05 AM - 12:05 PM, WHITE 4208 |
| 5/12 | Project final report due | 11:55 PM |
