| General Course Information |
| Course Overview |
| Announcements |
| Syllabus, Readings, Lecture Notes |
| Schedule |
| Homework and Project |
| Past Semesters |
|
Tentative Course Schedule
| Week | Date | Subject (BBCollaborate Ultra link) | Notes |
|---|---|---|---|
| 1 | 1/21 | Course Overview | HW0 out |
| 1/23 | Learning Motif Models | ||
| 2 | 1/28 | Learning Motif Models | |
| 1/30 | Learning Motif Models | ||
| 3 | 2/4 | Learning CRM Models | |
| 2/6 | Learning CRM Models | HW0 due, HW1 out | |
| 4 | 2/11 | Genotype Analysis | |
| 2/13 | Genotype Analysis | ||
| 5 | 2/18 | Genotype Analysis | |
| 2/20 | Genotype Analysis | HW1 due, HW2 out | |
| 6 | 2/25 | Epigenomics | |
| 2/27 | Epigenomics | ||
| 7 | 3/3 | Epigenomics | |
| 3/5 | Epigenomics | ||
| 8 | 3/10 | Mass Spectrometry | HW2 due |
| 3/12 | Midterm exam | in class | |
| Spring Break (3/14-22) | |||
| 9 | 3/24 | Network Analysis | Proposal due, HW3 out |
| 3/26 | Network Analysis | ||
| 10 | 3/31 | Machine Learning Modeling | |
| 4/2 | Machine Learning Modeling | ||
| 11 | 4/7 | RNA-seq and Transcriptome assembly | |
| 4/9 | RNA-seq and Transcriptome assembly | HW3 due, HW4 out | |
| 12 | 4/14 | RNA Structure Analysis | |
| 4/16 | RNA Structure Analysis | ||
| 13 | 4/21 | Gene Discovery | Progress due Apr 26 |
| 4/23 | Gene Discovery | ||
| 14 | 4/28 | Large-scale Alignment | |
| 4/30 | Large-scale Alignment | HW4 due | |
| 5/4 | Final exam | ||
| 5/11 | Project report due | ||