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Tentative Course Schedule
| Week | Date | Subject | Notes |
| 1 | 1/22 | Course Overview | |
| 1/24 | Learning Motif Models | |
| 2 | 1/29 | Learning Motif Models | |
| 1/31 | Learning Motif Models | HW0 out |
| 3 | 2/5 | Learning Motif Models | |
| 2/7 | Learning CRM Models | HW0 due, HW1 out |
| 4 | 2/12 | Learning CRM Models | |
| 2/14 | RNA-Seq | |
| 5 | 2/19 | RNA-Seq | |
| 2/21 | Transcriptome assembly | HW1 due, HW2 out |
| 6 | 2/26 | Transcriptome assembly | |
| 2/28 | RNA Secondary Structure and SCFGs | |
| 7 | 3/5 | RNA Secondary Structure and SCFGs | |
| 3/7 | RNA Secondary Structure and SCFGs | HW2 due |
| 8 | 3/12 | | Midterm (in class) |
| 3/14 | Epigenomics | |
| Spring Break |
| 9 | 3/26 | Epigenomics | Proposal due |
| 3/28 | Epigenomics | |
| 10 | 4/2 | Genotype Analysis | |
| 4/4 | Genotype
Analysis | |
| 11 | 4/9 | Genotype Analysis | |
| 4/11 | Genotype
Analysis | HW3 out |
| 12 | 4/16 | Genotype Analysis | |
| 4/18 | Mass Spectrometry | Progress
due |
| 13 | 4/23 | Network
Analysis | HW3 due, HW4 out |
| 4/25 | Network Analysis | |
| 14 | 4/30 | Large-scale Alignment | |
| 5/2 | Large-scale
Alignment | HW4 due |
| 5/5 | | Final exam |
| 5/13 | | Project report due |
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