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Tentative Course Schedule
| Week | Date | Subject | Notes |
| 1 | 1/23 | Course Overview | |
| 1/25 | Learning Motif Models | |
| 2 | 1/30 | Learning Motif Models | |
| 2/1 | Learning Motif Models | HW0 out |
| 3 | 2/6 | Learning Motif Models | |
| 2/8 | Learning CRM Models | HW0 due, HW1 out |
| 4 | 2/13 | Learning CRM Models | |
| 2/15 | Genotype Analysis | |
| 5 | 2/20 | Genotype Analysis | |
| 2/22 | Genotype Analysis | HW1 due, HW2 out |
| 6 | 2/27 | Epigenomics | |
| 3/1 | Epigenomics | |
| 7 | 3/6 | Epigenomics | |
| 3/8 | Epigenomics | HW2 due |
| 8 | 3/13 | | Midterm (in class) |
| 3/15 | Epigenomics | |
| 9 | 3/20 | Epigenomics | |
| 3/22 | RNA-Seq and Mass Spectrometry | Proposal due, HW3 out |
| Spring Break |
| 10 | 4/3 | RNA-Seq and Mass Spectrometry | |
| 4/5 | RNA-Seq and Mass Spectrometry | |
| 11 | 4/10 | Network Analysis | |
| 4/12 | Network Analysis | HW3 due |
| 12 | 4/17 | Gene Finding | |
| 4/19 | Gene Finding | Progress due, HW4 out |
| 13 | 4/24 | Large-scale Alignment | |
| 4/26 | Large-scale Alignment | |
| 14 | 5/1 | RNA Secondary Structure and SCFGs | |
| 5/3 | RNA Secondary Structure and SCFGs | HW4 due |
| 5/9 | | Final exam |
| 5/11 | | Project report due |
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