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Bansal, N., N. Casper, C.M. Kendziorski, and G.G. Hamedani. A class of non-inverse Gaussian distributions with finite positive and negative moments. Journal of Applied Statistical Science, 4:2-3, 203-214, 1996.
Kendziorski, C.M., J.B. Bassingthwaighte, and P.J. Tonellato. Evaluating maximum likelihood estimation methods to determine the Hurst coefficient. Physica A, 273:3-4, 439-451, 1999.
Newton, M.A., C.M. Kendziorski, C.S. Richmond, F.R. Blattner, and K.W. Tsui. On differential variability of expression ratios: Improving statistical inference about gene expression changes from microarray data. Journal of Computational Biology, 8, 37-52, 2001.
Lan, H., C.M. Kendziorski, L.A. Shepel, J.D. Haag, M.A. Newton, and M.N. Gould. Genetic loci controlling breast cancer susceptibility in the Wistar-Kyoto rat. Genetics, 157, 331-339, 2001.
Kendziorski, C.M., A.W. Cowley, Jr., A.S. Greene, M. Stoll, H. Salgado, H.J. Jacob, and P.J. Tonellato. Mapping baroreceptor function to genome: A mathematical modeling approach. Genetics, 160: 1687-1695, 2002.
Ntambi, J.M., M. Miyazaki, J.P. Stoehr, H. Lan, C.M. Kendziorski, B.S. Yandell, Y. Song, P. Cohen, J.M. Friedman, and A.D. Attie. Loss of stearoyl-CoA desaturase-1 function protects mice against adiposity. Proceedings of the National Academy of Sciences, 99:17, 11482-11486, 2002.
Kendziorski, C.M., M.A. Newton, H. Lan, and M.N. Gould. On parametric empirical Bayes methods for comparing multiple groups using replicated gene expression profiles. Statistics in Medicine, 22:3899-3914, 2003. A slightly modified version is available as Technical Report # 166, Department of Biostatistics and Medical Informatics, University of Wisconsin - Madison. Download technical report in postscript or pdf.
Kendziorski, C.M., Y. Zhang, H. Lan, and A.D. Attie. The efficiency of mRNA pooling in microarray experiments. Biostatistics , 4: 465-477, 2003. Fast Breaking Paper of June 2005.
Djamali, A., C.M. Kendziorski, P.C. Brazy, B.N. Becker. Disease Progression and Outcomes in Chronic Kidney Disease and Renal Transplantation. Kidney International , 64(5): 1800-1807, 2003.
Attie, A. and C.M. Kendziorski. PGC-1alpha at the crossroads of type 2 diabetes. Nature Genetics , 34: 244-245, 2003.
The Complex Trait Consortium [113 authors]. The Collaborative Cross, a community resource for the genetic analysis of complex traits. Nature Genetics 36: 1133-1137,2004.
Holzmacher, R., C.Kendziorski, R.M. Hoffman, J.Jaffery, B.Becker, and A.Djamali. Low Serum Magnesium is Associated with Decreased Graft Survival in Patients with Chronic Cyclosporine Nephrotoxicity, Nephrology Dialysis Transplantation , 20(7): 1456-1462, 2005.
Kendziorski, C., R.A. Irizarry, K.Chen, J.D.Haag, and M.N. Gould. On the utility of pooling biological samples in microarray experiments. Proceedings of the National Academy of Sciences, 102(12): 4252-4257, 2005.
Minn, A.H., C.A. Pise-Masison, M. Radonovich, M.N. Brady, P. Wang, C. Kendziorski, and A. Shalev. Gene Expression Profiling in INS-1 Cells Overexpressing Thioredoxin-Interacting Protein. Biochemical and Biophysical Research Communications, 336(3): 770-778, 2005.
Burleigh, D.W., C.Kendziorski, Y.J. Choi, K.M. Grindle, R.L. Grendell, R.R. Magness, and T.G. Golos. Microarray Analysis of BeWo and JEG3 Trophoblast Cell Lines: Identification of Differentially Expressed Transcripts, Placenta, June 22, 2006 [E-pub ahead of print].
Lan, H.*, M. Chen*, J.E. Byers, B.S. Yandell, D.S. Stapleton, C.M. Mata, E. Ton-Keen Mui, M.T. Flowers, K.L. Schueler, K.F. Manly, R.W. Williams, C. Kendziorski, and A.D. Attie. Combined Expression Trait Correlations and Expression Quantitative Trait Locus Mapping, PLoS Genetics, 2(1):e6. *co-first authors.
Kendziorski, C., M. Chen, M. Yuan, H. Lan, and A.D. Attie. Statistical Methods for Expression Quantitative Trait Loci (eQTL) Mapping. Biometrics , 62, 19-27, 2006.
C. Kendziorski and P. Wang. A Review of Statistical Methods for Expression Quantitative Trait Loci Mapping. Mammalian Genome 17(6), 509-517, 2006.
M.Yuan and C.Kendziorski. A Unified Approach for Simultaneous Gene Clustering and Differential Expression Identification. Biometrics 62(4): 1089-1098, 2006.
M.Yuan and C.Kendziorski. Hidden Markov Models for Microarray Time Course Data in Multiple Biological Conditions (with Discussion). Journal of the American Statistical Association 101(476): 1323-1332; Discussion 1332-1340, 2006.
Flowers, M.T., A. K. Groen, A.T. Oler, M.P. Gray-Keller, Y. Choi, K.L. Schueler, O.C. Richards, H. Lan, M. Miyazaki, F. Kuipers, C. Kendziorski, J. Ntambi, and A.D. Attie. Cholestasis and Hypercholesterolemia in SCD1-Deficient Mice Fed a Low-Fat, High-Carbohydrate Diet. Journal of Lipid Research 47: 2668-2680, 2006.
Edwards, M.G., R. Anderson, M. Yuan, C. Kendziorski, R. Weindruch, and T. Prolla. Gene Expression Profiling of Aging Reveals Activation of a p53-Mediated Transcriptional Program. BMC Genomics 8:80, 2007.
Amos-Landgraf, J.M.*, L.N. Kwong*, C. Kendziorski, M. Reichelderfer, J. Torrealba, J.P. Weichert, J.D. Haag, K.S. Chen, J.L. Waller, M.N. Gould, and W.F. Dove. A target-selected Apc-mutant rat kindred enhances the modeling of familial human colon cancer. Proceedings of the National Academy of Sciences 104(10): 4036-4041, 2007. *co-first authors.
Couto, F., A.H. Minn, C.A. Pise-Masison, M. Radonovich, J.N. Brady, M. Hanson, L.A. Fernandez, P. Wang, C. Kendziorski, and A. Shalev. Exenatide blocks JAK1-STAT1 in pancreatic beta cells. Metabolism, to appear, 2007.
Chen, M. and C. Kendziorski. A Statistical Framework for Expression Quantitative Trait Loci (eQTL) Mapping. Genetics, in revision, 2007.
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